From 51fdbd03573d8b1e11e78aac00d329a4ac55eb78 Mon Sep 17 00:00:00 2001
From: Joel Grunbaum <joelgrun@gmail.com>
Date: Tue, 28 Dec 2021 00:47:30 +0000
Subject: [PATCH] Removed semantic and other small tweaks

---
 config.org |  305 +++++++++++++++++++++++++++++++++-----------------
 1 files changed, 198 insertions(+), 107 deletions(-)

diff --git a/config.org b/config.org
index fa99565..5ca24d7 100644
--- a/config.org
+++ b/config.org
@@ -124,7 +124,7 @@
   (diminish 'flyspell-mode)
 
 #+END_SRC
-** Language Tool
+** COMMENT Language Tool
 Language tool is an open source grammar checker.
 #+BEGIN_SRC emacs-lisp
   (use-package langtool
@@ -135,17 +135,14 @@
 ** Switch-window
 Helps to change windows easily when many are open at once.
 #+BEGIN_SRC emacs-lisp
-(use-package switch-window
-  :ensure t
-  :config
-    (setq switch-window-input-style 'minibuffer)
-    (setq switch-window-increase 4)
-    (setq switch-window-threshold 2)
-    (setq switch-window-shortcut-style 'qwerty)
-    (setq switch-window-qwerty-shortcuts
-        '("a" "s" "d" "f" "j" "k" "l" "i" "o"))
-  :bind
-    ([remap other-window] . switch-window))
+  (use-package switch-window
+    :ensure t
+    :config
+      ;; (setq switch-window-input-style 'minibuffer)
+      (setq switch-window-threshold 2)
+      (setq switch-window-shortcut-style 'qwerty)
+    :bind
+      ([remap other-window] . switch-window))
 #+END_SRC
 
 ** Go to new window when opened
@@ -488,7 +485,7 @@
 #+END_SRC
 Shows trailing white space
 #+BEGIN_SRC emacs-lisp
-(add-hook 'prog-mode-hook (lambda () (interactive) (setq show-trailing-whitespace 1)))
+  (add-hook 'prog-mode-hook (lambda () (interactive) (setq show-trailing-whitespace 1)))
 #+END_SRC
 
 ** Whitespace mode
@@ -595,7 +592,7 @@
 ** Garbage collection
 Starts garbage collection every 100MB.
 #+BEGIN_SRC emacs-lisp
-(setq gc-cons-threshold 100000000)
+  (setq gc-cons-threshold (* 1024 1024 100))
 #+END_SRC
 
 ** Kill ring
@@ -614,7 +611,7 @@
 #+BEGIN_SRC emacs-lisp
   (setq c-default-style '((java-mode . "java")
                          (awk-mode . "awk")
-                         (other . "linux")))
+                         (other . "k&r")))
 #+END_SRC
 
 ** Coding system
@@ -624,12 +621,22 @@
   (set-keyboard-coding-system 'utf-8)
   (set-language-environment "UTF-8")
   (prefer-coding-system 'utf-8)
-  (setq-default indent-tabs-mode t
-                tab-width 8
+  (setq-default indent-tabs-mode nil
+                tab-width 4
                 c-basic-offset tab-width
                 cperl-indent-level tab-width)
+  (c-set-offset 'inline-open '0)
   (delete-selection-mode)
   (global-set-key (kbd "RET") 'newline-and-indent)
+#+END_SRC
+*** Smart tabs
+Tabs for indentation, spaces for alignment
+#+BEGIN_SRC emacs-lisp
+    (use-package smart-tabs-mode
+      :ensure t
+      :config
+      (smart-tabs-insinuate 'c 'c++ 'java 'javascript 'cperl 'python 'ruby
+                            'nxml))
 #+END_SRC
 
 ** Move to beginning of line ignoring whitespace
@@ -685,9 +692,15 @@
 Remote editing mode.
 Hate having to re-input passwords.
 #+BEGIN_SRC emacs-lisp
-  (when (eq system-type 'windows-nt)
-    (setq tramp-default-method "pscp"))
-  (setq password-cache-expiry nil)
+  (use-package tramp
+    :ensure t
+    :pin gnu
+    :config
+    ;; (setq tramp-default-method "ssh")
+    (when (eq system-type 'windows-nt)
+      (setq tramp-default-method "pscp"))
+    (setq password-cache-expiry nil)
+    (add-to-list 'tramp-remote-path 'tramp-own-remote-path))
 #+END_SRC
 
 ** COMMENT Y or N instead of yes or no
@@ -791,7 +804,6 @@
   :config
   (flycheck-pos-tip-mode))
 #+END_SRC
-
 ** Company
 Company is auto-complete for Emacs.
 Uses various backends, more of which are added later.
@@ -808,18 +820,19 @@
 ** LSP Mode
 Use LSP for completion suggestions.
 Causes too much memory usage, need to debug.
+Need to generate ~compile_flags~ for c/c++, can use ~bear~ but may need other tools.
 #+BEGIN_SRC emacs-lisp
   (use-package lsp-mode
     :ensure t
     :hook (((c-mode
-             cpp-mode
+             c++-mode
              tex-mode
              latex-mode
              TeX-mode
              LaTeX-mode
              rust-mode
              sh-mode
-             verilog-mode
+             ;; verilog-mode
              go-mode) . lsp))
     :init
     (setq lsp-keymap-prefix "C-c l")
@@ -830,11 +843,11 @@
     (setq lsp-completion-provider :capf)
     (setq lsp-keep-workspace-alive 'nil)
     (add-to-list 'exec-path "~/.cargo/bin"))
-  
+
   (use-package lsp-ui
     :ensure t
     :commands lsp-ui-mode)
-  
+
   (use-package helm-lsp
     :ensure t
     :commands helm-lsp-workspace-symbol)
@@ -851,61 +864,93 @@
 Emacs git client.
 Pretty good and offers fairly decent features.
 #+BEGIN_SRC emacs-lisp
-  (use-package magit
-    :ensure t
-    :commands magit-get-top-dir
-    :bind ("C-x g" . magit-status)
-    :init
-    (progn
-      ;; make magit status go full-screen but remember previous window
-      ;; settings
-      ;; from: http://whattheemacsd.com/setup-magit.el-01.html
-      (defadvice magit-status (around magit-fullscreen activate)
-        (window-configuration-to-register :magit-fullscreen)
-        ad-do-it
-        (delete-other-windows))
-
-      ;; Close popup when committing - this stops the commit window
-      ;; hanging around
-      ;; From: http://git.io/rPBE0Q
-      (defadvice git-commit-commit (after delete-window activate)
-        (delete-window))
-
-      (defadvice git-commit-abort (after delete-window activate)
-        (delete-window))
-
-      :config
+    (use-package magit
+      :ensure t
+      :commands magit-get-top-dir
+      :bind ("C-x g" . magit-status)
+      :init
       (progn
-        ;; restore previously hidden windows
-        (defadvice magit-quit-window (around magit-restore-screen activate)
-          (let ((current-mode major-mode))
-            ad-do-it
-            ;; we only want to jump to register when the last seen buffer
-            ;; was a magit-status buffer.
-            (when (eq 'magit-status-mode current-mode)
-              (jump-to-register :magit-fullscreen)))))
+        ;; make magit status go full-screen but remember previous window
+        ;; settings
+        ;; from: http://whattheemacsd.com/setup-magit.el-01.html
+        (defadvice magit-status (around magit-fullscreen activate)
+          (window-configuration-to-register :magit-fullscreen)
+          ad-do-it
+          (delete-other-windows))
 
-      ;; magit settings
-      (setq
-       ;; don't put "origin-" in front of new branch names by default
-       magit-default-tracking-name-function 'magit-default-tracking-name-branch-only
-       ;; open magit status in same window as current buffer
-       magit-status-buffer-switch-function 'switch-to-buffer
-       ;; highlight word/letter changes in hunk diffs
-       magit-diff-refine-hunk t
-       ;; ask me if I want to include a revision when rewriting
-       magit-rewrite-inclusive 'ask
-       ;; ask me to save buffers
-       magit-save-some-buffers t
-       ;; pop the process buffer if we're taking a while to complete
-       magit-process-popup-time 10
-       ;; ask me if I want a tracking upstream
-       magit-set-upstream-on-push 'askifnotset
-       )))
+        ;; Close popup when committing - this stops the commit window
+        ;; hanging around
+        ;; From: http://git.io/rPBE0Q
+        (defadvice git-commit-commit (after delete-window activate)
+          (delete-window))
+
+        (defadvice git-commit-abort (after delete-window activate)
+          (delete-window))
+
+        :config
+        (progn
+          ;; restore previously hidden windows
+          (defadvice magit-quit-window (around magit-restore-screen activate)
+            (let ((current-mode major-mode))
+              ad-do-it
+              ;; we only want to jump to register when the last seen buffer
+              ;; was a magit-status buffer.
+              (when (eq 'magit-status-mode current-mode)
+                (jump-to-register :magit-fullscreen)))))
+
+        ;; magit settings
+        (setq
+         ;; don't put "origin-" in front of new branch names by default
+         magit-default-tracking-name-function 'magit-default-tracking-name-branch-only
+         ;; open magit status in same window as current buffer
+         magit-status-buffer-switch-function 'switch-to-buffer
+         ;; highlight word/letter changes in hunk diffs
+         magit-diff-refine-hunk t
+         ;; ask me if I want to include a revision when rewriting
+         magit-rewrite-inclusive 'ask
+         ;; ask me to save buffers
+         magit-save-some-buffers t
+         ;; pop the process buffer if we're taking a while to complete
+         magit-process-popup-time 10
+         ;; ask me if I want a tracking upstream
+         magit-set-upstream-on-push 'askifnotset
+         ))
+      )
+#+END_SRC
+
+*** More general yes and no prompt
+The default setting can miss some.
+Don't redefine the regex in case this is too general.
+#+BEGIN_SRC emacs-lisp
+  ;;(when-let ((regex "[\[\(]]?\\([Yy]\\(es\\)?\\)[/|]\\([Nn]o?\\)[\]\)]")
+  (defun magit-process-general-yn-prompt-hook (proc str)
+    "Handle [y/n] prompts"
+    (when-let ((beg (string-match "[\[\(]]?\\([Yy]\\(es\\)?\\)[/|]\\([Nn]o?\\)[\]\)]" str)))
+      (let ;; ((max-mini-window-height 30))
+          (process-send-string
+           proc
+           (downcase
+            (concat
+             (match-string
+              (if (save-match-data
+                    (magit-process-kill-on-abort proc
+                                                 (y-or-n-p (substring str 0 beg)))) 1 2)
+              str)
+             "\n"))))))
+
+  (add-hook 'magit-process-prompt-functions
+            #'magit-process-general-yn-prompt-hook)
+#+END_SRC
+*** Gerrit integration
+Gerrit takes ~origin:refs/for/master~ as a destination.
+Enable magit to work with its oddities.
+#+BEGIN_SRC emacs-lisp
+  (use-package magit-gerrit
+    :ensure t)
 #+END_SRC
 
 ** CEDET
-*** Semantic
+*** COMMENT Semantic
 Parser library for code, supports many other packages.
 Allows emacs to be more aware of what is being written.
 #+BEGIN_SRC emacs-lisp
@@ -955,7 +1000,8 @@
 
 ** Language specific configs
 *** C/C++
-**** Flycheck clang
+**** Flycheck
+***** Flycheck clang
 Add the clang backend for linting.
 #+BEGIN_SRC emacs-lisp
   (use-package flycheck-clang-analyzer
@@ -966,8 +1012,24 @@
       (require 'flycheck-clang-analyzer)
        (flycheck-clang-analyzer-setup)))
 #+END_SRC
+***** Flycheck project root
+Flycheck tends to fail finding the project root, giving errors about missing files.
+This should remove them.
+#+BEGIN_SRC emacs-lisp
+  (defun setup-flycheck-project-path ()
+    (let ((root (ignore-errors (projectile-project-root))))
+      (when root
+        (add-to-list
+         (make-variable-buffer-local 'flycheck-clang-include-path)
+         root)
+        (add-to-list
+         (make-variable-buffer-local 'flycheck-gcc-include-path)
+         root))))
 
-**** Company
+  (add-hook 'c-mode-hook 'setup-flycheck-project-path)
+  (add-hook 'c++-mode-hook 'setup-flycheck-project-path)
+#+END_SRC
+**** COMMENT Company
 Add header completion as well as Irony, which uses clang for suggestions.
 #+BEGIN_SRC emacs-lisp
   (use-package company-c-headers
@@ -976,7 +1038,9 @@
       :config
       (add-hook 'c++-mode-hook 'company-mode)
       (add-hook 'c-mode-hook 'company-mode))
-
+#+END_SRC
+**** COMMENT Irony
+#+BEGIN_SRC emacs-lisp
   (use-package irony
     :ensure t
     :init
@@ -998,19 +1062,29 @@
 **** Clang-format
 Automatically format buffer on save.
 #+BEGIN_SRC emacs-lisp
-  (when (file-exists-p "/usr/share/clang/clang-format.el")
-    (load "/usr/share/clang/clang-format.el")
-    (setq clang-format-linux-style (concat "{BasedOnStyle: LLVM,"
-                                           "IndentWidth: 8,"
-                                           "UseTab: Always,"
-                                           "BreakBeforeBraces: Linux,"
-                                           "AllowShortIfStatementsOnASingleLine: false,"
-                                           "IndentCaseLabels: false}"))
-    (setq-default clang-format-style clang-format-linux-style)
-    (defun clang-format-on-save ()
-      (add-hook 'before-save-hook 'clang-format-buffer nil t))
-    (add-hook 'c-mode-hook 'clang-format-on-save nil t)
-    (add-hook 'c++-mode-hook 'clang-format-on-save nil t))
+      (defun set-clang-format-style ()
+          (if (file-exists-p (concat
+                              (projectile-project-root)
+                              ".clang-format"))
+              (setq-local clang-format-style nil)
+            (setq-local clang-format-style (concat "{BasedOnStyle: LLVM,"
+                                                   "IndentWidth: " (format "%s" tab-width) ","
+                                                   "UseTab: " (if (eq indent-tabs-mode nil)
+                                                                  "Never"
+                                                                "AlignWithSpaces")
+  ","
+                                                   "BreakBeforeBraces: Linux,"
+                                                   "AllowShortIfStatementsOnASingleLine: false,"
+                                                   "IndentCaseLabels: false}"))))
+
+      (use-package clang-format
+        :ensure t
+        :hook (c-mode-common . (set-clang-format-style)))
+
+      ;;   (defun clang-format-on-save ()
+      ;;     (add-hook 'before-save-hook 'clang-format-buffer nil t))
+      ;;   (add-hook 'c-mode-hook 'clang-format-on-save nil t)
+      ;;   (add-hook 'c++-mode-hook 'clang-format-on-save nil t))
 #+END_SRC
 *** emacs-lisp
 **** COMMENT Company
@@ -1154,7 +1228,7 @@
        '("\\.rkt$" . racket-mode)))
 #+END_SRC
 
-*** COMMENT Verilog
+*** Verilog
 **** Get latest version
 Use latest version from repositories.
 #+BEGIN_SRC emacs-lisp
@@ -1163,9 +1237,29 @@
     :pin gnu
     :config
     (autoload 'verilog-mode "verilog-mode" "Verilog mode" t )
-    (add-to-list 'auto-mode-alist '("\\.[ds]?va?h?\\'" . verilog-mode)))
+    (add-to-list 'auto-mode-alist '("\\.[ds]?va?h?\\'" . verilog-mode))
+    (setq-default verilog-align-ifelse t
+                  verilog-auto-delete-trailing-whitespace t
+                  verilog-auto-inst-param-value t
+                  verilog-auto-lineup 'all
+                  verilog-auto-newline nil
+                  verilog-auto-save-policy nil
+                  verilog-auto-template-warn-unused t
+                  verilog-auto-endcomments nil
+                  verilog-highlight-grouping-keywords t
+                  verilog-highlight-modules t
+                  verilog-tab-to-comment t
+                  verilog-indent-begin-after-if nil
+                  verilog-indent-lists nil
+                  verilog-case-indent 4
+                  verilog-cexp-indent 0
+                  verilog-indent-level 4
+                  verilog-indent-level-behavioral 4
+                  verilog-indent-level-declaration 4
+                  verilog-indent-level-directive 4
+                  verilog-indent-level-module 4))
 #+END_SRC
-
+#+END_SRC
 *** COMMENT MATLAB
 Mode for editing MATLAB m-files.
 #+BEGIN_SRC emacs-lisp
@@ -1224,7 +1318,7 @@
   (use-package flycheck-rust
     :ensure t
     :config
-    (add-hook 'flyckeck-mode-hook #'flycheck-rust-setup))
+    (add-hook 'flycheck-mode-hook #'flycheck-rust-setup))
 #+END_SRC
 *** Go
 **** Major mode
@@ -1234,9 +1328,6 @@
     :config
     (add-hook 'before-save-hook #'gofmt-before-save))
 #+END_SRC
-
-#+RESULTS:
-: t
 
 **** Flycheck
 #+BEGIN_SRC emacs-lisp
@@ -1261,14 +1352,14 @@
 ** Small tweaks
 Small quality of life changes to org-mode.
 #+BEGIN_SRC emacs-lisp
-(setq org-src-fontify-natively t)
-(setq org-src-tab-acts-natively t)
-(setq org-confirm-babel-evaluate nil)
-(setq org-export-with-smart-quotes t)
-(setq org-src-window-setup 'current-window)
-(add-hook 'org-mode-hook 'org-indent-mode)
-(diminish 'org-indent-mode)
-(diminish 'visual-line-mode)
+  (setq org-src-fontify-natively t
+        org-src-tab-acts-natively t
+        org-confirm-babel-evaluate nil
+        org-export-with-smart-quotes t
+        org-src-window-setup 'current-window)
+  (add-hook 'org-mode-hook 'org-indent-mode)
+  (diminish 'org-indent-mode)
+  (diminish 'visual-line-mode)
 #+END_SRC
 *** Spell checking for code and latex
 #+BEGIN_SRC emacs-lisp
@@ -1467,7 +1558,7 @@
     :defer t)
 #+END_SRC
 
-* Journaling
+* COMMENT Journaling
 ** Noteworthy entries
 I write weekly journal entries recapping my week.
 These files are in org mode.

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